Stereospecific dihaloalkane binding in a pH-sensitive cavity in cubic insulin crystals.
- 20 December 1994
- journal article
- Published by Proceedings of the National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 91 (26) , 12388-12392
- https://doi.org/10.1073/pnas.91.26.12388
Abstract
Crystallographic analysis at 2-A resolution of the selective binding of dihalogenated methane, ethane, and ethylene compounds in the cavity on the cubic insulin dimer axis provides a model for anesthetic-protein interactions. At pH 6-11, 1,2-dichloroethane binds isomorphically in the right-handed cis-conformation, displacing four water molecules from the invariant cavity. Lowering the pH to 5.7 in 1 M Na2SO4 without dihaloalkanes induces a cooperative structural transition in which the dyad cavities between B13 glutamate pairs are constricted, and SO4(2-) ions are bound by rearranged triads of B1 NH+3 groups. In the presence of dichloroethane at pH 5-5.5, the equilibrium is shifted to a mixture of the ligand-bound and ligand-excluding cavity structures, with half-occupancy of the sulfate sites, exemplifying how a volatile anesthetic can act as an allosteric effector. Measurements at pH 9 of the occupancies of structurally similar dihaloalkanes demonstrate a high degree of binding selectivity. Induced polarization of the ligand and bound water by the charge distribution in the binding cavity apparently provides the selective electrostatic interactions that discriminate between dihaloalkanes of comparable size and polarity.Keywords
This publication has 21 references indexed in Scilit:
- X-ray analysis of the single chain B29-A1 peptide-linked insulin moleculeJournal of Molecular Biology, 1991
- Structure of the pig insulin dimer in the cubic crystalActa crystallographica Section B, Structural science, crystal engineering and materials, 1991
- The Structure and Function of the Aspartic ProteinasesAnnual Review of Biophysics, 1990
- The structure of 2Zn pig insulin crystals at 1.5 Å resolutionPhilosophical Transactions of the Royal Society of London. B, Biological Sciences, 1988
- Protein-ligand dynamicsJournal of Molecular Biology, 1988
- Structure of Tobacco Mosaic Virus at 3.6 Å Resolution: Implications for AssemblyScience, 1986
- Mapping of general anaesthetic target sites provides a molecular basis for cutoff effectsNature, 1985
- Stereochemically restrained refinement of macromolecular structuresPublished by Elsevier ,1985
- Zinc-free cubic pig insulin: Crystallization and structure determinationJournal of Molecular Biology, 1978
- Assembly and Stability of the Tobacco Mosaic Virus ParticlePublished by Elsevier ,1964