Refined 1.2 A crystal structure of the complex formed between subtilisin Carlsberg and the inhibitor eglin c. Molecular structure of eglin and its detailed interaction with subtilisin.
Open Access
- 1 April 1986
- journal article
- research article
- Published by Springer Nature in The EMBO Journal
- Vol. 5 (4) , 813-818
- https://doi.org/10.1002/j.1460-2075.1986.tb04286.x
Abstract
The crystal structure of the complex formed between eglin c, an elastase inhibitor from the medical leech, and subtilisin Carlsberg has been determined at 1.2 A resolution by a combination of Patterson search methods and isomorphous replacement techniques. The structure has been refined to a crystallographic R‐value of 0.18 (8‐1.2 A). Eglin consists of a four‐stranded beta‐sheet with an alpha‐helical segment and the protease‐binding loop fixed on opposite sides. This loop, which contains the reactive site Leu45I‐‐Asp46I, is mainly held in its conformation by unique electrostatic/hydrogen bond interactions of Thr44I and Asp46I with the side chains of Arg53I and Arg51I which protrude from the hydrophobic core of the molecule. The conformation around the reactive site is similar to that found in other proteinase inhibitors. The nine residues of the binding loop Gly40I‐‐Arg48I are involved in direct contacts with subtilisin. In this interaction, eglin segment Pro42I‐‐Thr44I forms a three‐stranded anti‐parallel beta‐sheet with subtilisin segments Gly100‐‐Gly102 and Ser125‐‐Gly127. The reactive site peptide bond of eglin is intact, and Ser221 OG of the enzyme is 2.81 A apart from the carbonyl carbon.This publication has 24 references indexed in Scilit:
- Crystal and molecular structure of the inhibitor eglin from leeches in complex with subtilisin CarlsbergFEBS Letters, 1985
- Determination of the Protein Content of Crystals Formed byMastigocladus laminosusC-Phycocyanin,Chroomonas spec.Phycocyanin-645 and Modified Human Fibrinogen Using an Improved Ficoll Density Gradient MethodBiological Chemistry Hoppe-Seyler, 1985
- Crystal structure at 2.6 Å resolution of the complex of subtilisin BPN′ with Streptomyces subtilisin inhibitorJournal of Molecular Biology, 1984
- Structure of the complex of Streptomyces griseus protease B and the third domain of the turkey ovomucoid inhibitor at 1.8-.ANG. resolutionBiochemistry, 1983
- Crystallographic refinement of Japanese quail ovomucoid, a Kazal-type inhibitor, and model building studies of complexes with serine proteasesJournal of Molecular Biology, 1982
- Protein Inhibitors of ProteinasesAnnual Review of Biochemistry, 1980
- The protein data bank: A computer-based archival file for macromolecular structuresJournal of Molecular Biology, 1977
- Isolation and Characterisation of a Low Molecular Weight Inhibitor (of Chymotrypsin and Human Granulocytic Elastase and Cathepsin G) from LeechesHoppe-Seyler´s Zeitschrift Für Physiologische Chemie, 1976
- Structure of the complex formed by bovine trypsin and bovine pancreatic trypsin inhibitorJournal of Molecular Biology, 1974
- Prediction of protein conformationBiochemistry, 1974