Massively parallel sequencing and identification of genes for primary lymphoedema: a perfect fit
- 13 June 2011
- journal article
- review article
- Published by Wiley in Clinical Genetics
- Vol. 80 (2) , 110-116
- https://doi.org/10.1111/j.1399-0004.2011.01706.x
Abstract
Ostergaard P, Simpson MA, Jeffery S. Massively parallel sequencing and the identification of genes for primary lymphoedema: a perfect fit.Primary lymphoedema is a clinically and genetically heterogeneous group of disorders characterized by disruption of the lymphatic system. To date, the majority of the causative genes in primary lymphoedema have been identified through linkage analysis in large families with multiple affected subjects. Studies aimed at isolating additional genes responsible for primary lymphoedema have been hampered by cohorts comprised primarily of sporadic cases and small affected kindreds. In the absence of genetic heterogeneity, recent development of massively parallel DNA sequencing technology, specifically exome sequencing, has provided novel paradigms for disease gene identification in such cohorts. In this review, we summarize the novel approaches to disease gene discovery with massively parallel sequencing also known as Next Generation Sequencing (NGS), and show how the selection of unrelated affected cases from clinically homogenous phenotypic subclassifications is proving to be a successful approach for disease gene discovery in primary lymphoedema.Keywords
This publication has 38 references indexed in Scilit:
- A new classification system for primary lymphatic dysplasias based on phenotypeClinical Genetics, 2010
- Analysis of the phenotypic abnormalities in lymphoedema-distichiasis syndrome in 74 patients with FOXC2 mutations or linkage to 16q24Journal of Medical Genetics, 2002
- Classification des lymphœdèmesLa Revue de Médecine Interne, 2002
- Clinical heterogeneity in lymphoedema-distichiasis with FOXC2 truncating mutationsJournal of Medical Genetics, 2001
- Analysis of lymphoedema-distichiasis families forFOXC2 mutations reveals small insertions and deletions throughout the geneHuman Genetics, 2001
- Mutations in FOXC2 (MFH-1), a Forkhead Family Transcription Factor, Are Responsible for the Hereditary Lymphedema-Distichiasis SyndromeAmerican Journal of Human Genetics, 2000
- Congenital Hereditary Lymphedema Caused by a Mutation That Inactivates VEGFR3 Tyrosine KinaseAmerican Journal of Human Genetics, 2000
- Missense mutations interfere with VEGFR-3 signalling in primary lymphoedemaNature Genetics, 2000
- A Gene for Lymphedema-Distichiasis Maps to 16q24.3American Journal of Human Genetics, 1999
- Mapping of Primary Congenital Lymphedema to the 5q35.3 RegionAmerican Journal of Human Genetics, 1999