Automating dChip: toward reproducible sharing of microarray data analysis
Open Access
- 8 May 2008
- journal article
- Published by Springer Nature in BMC Bioinformatics
- Vol. 9 (1) , 231
- https://doi.org/10.1186/1471-2105-9-231
Abstract
During the past decade, many software packages have been developed for analysis and visualization of various types of microarrays. We have developed and maintained the widely used dChip as a microarray analysis software package accessible to both biologist and data analysts. However, challenges arise when dChip users want to analyze large number of arrays automatically and share data analysis procedures and parameters. Improvement is also needed when the dChip user support team tries to identify the causes of reported analysis errors or bugs from users.Keywords
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