Chemical derivatization and mass spectral libraries in metabolic profiling by GC/MS and LC/MS/MS
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Open Access
- 20 December 2004
- journal article
- review article
- Published by Oxford University Press (OUP) in Journal of Experimental Botany
- Vol. 56 (410) , 219-243
- https://doi.org/10.1093/jxb/eri069
Abstract
An overview is presented of gas chromatography/mass spectrometry (GC/MS) and liquid chromatography/mass spectrometry (LC/MS), the two major hyphenated techniques employed in metabolic profiling that complement direct ‘fingerprinting’ methods such as atmospheric pressure ionization (API) quadrupole time-of-flight MS, API Fourier transform MS, and NMR. In GC/MS, the analytes are normally derivatized prior to analysis in order to reduce their polarity and facilitate chromatographic separation. The electron ionization mass spectra obtained are reproducible and suitable for library matching, mass spectral collections being readily available. In LC/MS, derivatization and library matching are at an early stage of development and mini-reviews are provided. Chemical derivatization can dramatically increase the sensitivity and specificity of LC/MS methods for less polar compounds and provides additional structural information. The potential of derivatization for metabolic profiling in LC/MS is demonstrated by the enhanced analysis of plant extracts, including the potential to measure volatile acids such as formic acid, difficult to achieve by GC/MS. The important role of mass spectral library creation and usage in these techniques is discussed and illustrated by examples.Keywords
This publication has 118 references indexed in Scilit:
- Functional genomics via metabolic footprinting: monitoring metabolite secretion by Escherichia coli tryptophan metabolism mutants using FT–IR and direct injection electrospray mass spectrometryComparative and Functional Genomics, 2003
- Matched filtering with background suppression for improved quality of base peak chromatograms and mass spectra in liquid chromatography–mass spectrometryAnalytica Chimica Acta, 2001
- How to validate analytical methodsTrAC Trends in Analytical Chemistry, 1999
- Qualitative assessment of leachables using data-dependent liquid chromatography/mass spectrometry and liquid chromatography/tandem mass spectrometryRapid Communications in Mass Spectrometry, 1997
- A Picomole-Scale Method for Charge Derivatization of Peptides for Sequence Analysis by Mass SpectrometryAnalytical Chemistry, 1997
- Characterization of over‐the‐counter cough/cold medications by liquid chromatography/electrospray mass spectrometryRapid Communications in Mass Spectrometry, 1995
- The analysis of diagnostic markers of genetic disorders in human blood and urine using tandem mass spectrometry with liquid secondary ion mass spectrometryInternational Journal of Mass Spectrometry and Ion Processes, 1991
- Standard reference spectra for tandem mass spectrometry quality assurance, performance evaluation and proficiency testing: Tandem mass spectrometers which use RF‐only multipole collision cellsRapid Communications in Mass Spectrometry, 1991
- Microderivatization of peptides by placing a fixed positive charge at the N-terminus to modify high energy collision fragmentationInternational Journal of Mass Spectrometry and Ion Processes, 1990
- Gas‐chromatographische Charakterisierung organischer Verbindungen. Teil 1: Retentionsindices aliphatischer Halogenide, Alkohole, Aldehyde und KetoneHelvetica Chimica Acta, 1958