The SBASE protein domain library, release 7.0: a collection of annotated protein sequence segments
Open Access
- 1 January 2000
- journal article
- research article
- Published by Oxford University Press (OUP) in Nucleic Acids Research
- Vol. 28 (1) , 260-262
- https://doi.org/10.1093/nar/28.1.260
Abstract
SBASE 7.0 is the seventh release of the SBASE protein domain library sequences that contains 237 937 annotated structural, functional, ligand-binding and topogenic segments of proteins, cross-referenced to all major sequence databases and sequence pattern collections. The entries are clustered into over 1811 groups and are provided with two WWW-based search facilities for on-line use. SBASE 7.0 is freely available by anonymous ‘ftp’ file transfer from ftp.icgeb.trieste.it . Automated searching of SBASE with BLAST can be carried out with the WWW servers http://www.icgeb. trieste.it/sbase/ and http://sbase.abc.hu/sbase/Keywords
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