Strategies for Overcoming PCR Inhibition
- 1 March 2008
- journal article
- Published by Cold Spring Harbor Laboratory in Cold Spring Harbor Protocols
- Vol. 2008 (3) , pdb.top20
- https://doi.org/10.1101/pdb.top20
Abstract
The use of conventional and real-time PCR is to some extent restricted by the presence of PCR inhibitors. This is particularly so when the techniques are applied directly to complex biological samples such as clinical, environmental, or food samples for the detection of microorganisms. PCR inhibitors can originate from the sample itself, or as a result of the method used to collect or otherwise prepare the sample. Either way, inhibitors can dramatically reduce the sensitivity and amplification efficiency of PCR. This article discusses methods of reducing inhibition and designing reliable and sensitive conventional and real-time PCR experiments.Keywords
This publication has 61 references indexed in Scilit:
- Factors affecting PCR‐mediated recombinationEnvironmental Microbiology, 2002
- Modeling of 5′ Nuclease Real-Time Responses for Optimization of a High-Throughput Enrichment PCR Procedure for Salmonella entericaJournal of Clinical Microbiology, 2002
- A new mathematical model for relative quantification in real-time RT-PCRNucleic Acids Research, 2001
- A sample preparation method which facilitates detection of bacteria in blood cultures by the polymerase chain reactionJournal of Microbiological Methods, 1998
- Real time quantitative PCR.Genome Research, 1996
- Peptide rescue of an N‐terminal truncation of the stoffel fragment of Taq DNA polymeraseProtein Science, 1996
- Methods for the separation and concentration of bacteria from foodsTrends in Food Science & Technology, 1991
- Isolation and physical properties of the DNA‐directed RNA polymerase from Thermus thermophilus HB8European Journal of Biochemistry, 1990
- Purification and characterization of DNA polymerase from the archaebacterium Methanobacterium thermoautotrophicumBiochemistry, 1986
- DNA polymerases from the extremely thermophilic bacterium Thermus thermophilus HB-8European Journal of Biochemistry, 1985