Physical mapping of the CXC chemokine locus on human chromosome 4
- 7 May 1999
- journal article
- Published by S. Karger AG in Cytogenetic and Genome Research
- Vol. 84 (1-2) , 39-42
- https://doi.org/10.1159/000015209
Abstract
A physical map of the CXC chemokine locus on chromosome 4 has been constructed by PCR analysis and PFGE mapping of YAC clones. The genes for IL8, GRO1, PPBP, PF4, SCYB5 (ENA-78) and SCYB6 (GCP-2) have been co-localized on a 335-kb genomic fragment. The GRO2 and GRO3 genes did not map within this region and based on analysis of a YAC contig overlapping IL8 we speculate that GRO2 and GRO3 map downstream of this region. We have also assigned the novel CXC chemokine gene, SCYB9B (alias H174/βR1) to chromosome 4q21, upstream and within 12 kb of INP10. Like INP10 and MIG, INP10 and SCYB9B are arranged in a head to tail manner. The chromosomal arrangement of these genes appears to reflect the evolution of this multigene family and supports the theory that it arose by gene duplication.Keywords
This publication has 5 references indexed in Scilit:
- B Cell–attracting Chemokine 1, a Human CXC Chemokine Expressed in Lymphoid Tissues, Selectively Attracts B Lymphocytes via BLR1/CXCR5The Journal of Experimental Medicine, 1998
- A B-cell-homing chemokine made in lymphoid follicles activates Burkitt's lymphoma receptor-1Nature, 1998
- A new class of membrane-bound chemokine with a CX3C motifNature, 1997
- Characterization of β-R1, a Gene That Is Selectively Induced by Interferon β (IFN-β) Compared with IFN-αJournal of Biological Chemistry, 1996
- Structure and Chromosomal Localization of the Human Stromal Cell-Derived Factor 1 (SDF1) GeneGenomics, 1995