Characterization of a marine gammaproteobacterium capable of aerobic anoxygenic photosynthesis
- 20 February 2007
- journal article
- Published by Proceedings of the National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 104 (8) , 2891-2896
- https://doi.org/10.1073/pnas.0608046104
Abstract
Members of the gammaproteobacterial clade NOR5/OM60 regularly form an abundant part, up to 11%, of the bacterioplankton community in coastal systems during the summer months. Here, we report the nearly complete genome sequence of one cultured representative, Congregibacter litoralis strain KT71, isolated from North Sea surface water. Unexpectedly, a complete photosynthesis superoperon, including genes for accessory pigments, was discovered. It has a high sequence similarity to BAC clones from Monterey Bay [Beja O, Suzuki MT, Heidelberg JF, Nelson WC, Preston CM, et al . (2002) Nature 415:630–633], which also share a nearly identical gene arrangement. Although cultures of KT71 show no obvious pigmentation, bacteriochlorophyll a and spirilloxanthin-like carotenoids could be detected by HPLC analysis in cell extracts. The presence of two potential BLUF (blue light using flavin adenine dinucleotide sensors), one of which was found adjacent to the photosynthesis operon in the genome, indicates a light- and redox-dependent regulation of gene expression. Like other aerobic anoxygenic phototrophs (AAnPs), KT71 is able to grow neither anaerobically nor photoautotrophically. Cultivation experiments and genomic evidence show that KT71 needs organic substrates like carboxylic acids, oligopeptides, or fatty acids for growth. The strain grows optimally under microaerobic conditions and actively places itself in a zone of ≈10% oxygen saturation. The genome analysis of C. litoralis strain KT71 identifies the gammaproteobacterial marine AAnPs, postulated based on BAC sequences, as members of the NOR5/OM60 clade. KT71 enables future experiments investigating the importance of this group of gammaproteobacterial AAnPs in coastal environments.Keywords
This publication has 78 references indexed in Scilit:
- A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomesProceedings of the National Academy of Sciences, 2006
- Distribution of planktonic aerobic anoxygenic photoheterotrophic bacteria in the northwest AtlanticLimnology and Oceanography, 2006
- Aerobic Anoxygenic Phototrophic Bacteria in the Mid-Atlantic Bight and the North Pacific GyreApplied and Environmental Microbiology, 2006
- Physiological Conditions Conducive to High Cyanophycin Content in Biomass ofAcinetobacter calcoaceticusStrain ADP1Applied and Environmental Microbiology, 2005
- TheshxVWlocus is essential for oxidation of inorganic sulfur and molecular hydrogen byParacoccus pantotrophusGB17: a novel function for lithotrophyFEMS Microbiology Letters, 2001
- Contribution of Aerobic Photoheterotrophic Bacteria to the Carbon Cycle in the OceanScience, 2001
- Predicting transmembrane protein topology with a hidden markov model: application to complete genomes11Edited by F. CohenJournal of Molecular Biology, 2001
- A Whole-Genome Assembly of DrosophilaScience, 2000
- Improved microbial gene identification with GLIMMERNucleic Acids Research, 1999
- tRNAscan-SE: A Program for Improved Detection of Transfer RNA Genes in Genomic SequenceNucleic Acids Research, 1997