Macromolecular synthesis after a nutritional shift-up of Bacillus subtilis

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Abstract
Effects of amino acids on macromolecular synthesis in Bacillus subtilis were studied. Two mutants, CRK4001 and NIG45, that were selected as slow growers in rich media were proved to be useful to analyse early events occurring after addition of amino acids to exponentially growing cells in a glucose-salts medium (nutritional shift-up). In a wild type strain, the rate of stable RNA (sRNA: essentially ribosomal RNA) synthesis increased 2.3 fold shortly after the shift-up to the rate characteristic of the post-shift steady state growth. In contrast, sRNA synthesis in the mutant strains responded to the shift-up in two steps. Thus, shortly after the shift the rate of sRNA synthesis increased 2.2 fold as in the wild type, but this increased level was maintained temporarily for 60 min and suddenly decreased to the post-shift steady state rate (1.4 fold increase). On the other hand, rates of DNA synthesis increased some 30 min after the shift directly to the post-shift steady state rates in all strains. Ratios of an origin to a terminus marker (purA/metB) began to increase exponentially to reach maximum values at 60 min after the shift, indicating that initiation of DNA replication occurred at frequencies characteristic of respective post-shift growth rates soon after the shift. These results revealed that the initial increase in the rate of sRNA synthesis and the frequency of initiation of DNA replication after nutritional shift are not related to each other and are independently affected by amino acids. In concert with these findings, the increase in sRNA synthesis was not affected by inhibition of DNA synthesis for the first 60 min after the shift, while it was completely prevented by puromycin and chloramphenicol. Protein synthesis for 10 min after the shift was sufficient to fully change the sRNA synthesis rate by amino acids.

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