PDBsum more: new summaries and analyses of the known 3D structures of proteins and nucleic acids
Top Cited Papers
Open Access
- 17 December 2004
- journal article
- Published by Oxford University Press (OUP) in Nucleic Acids Research
- Vol. 33 (Database ) , D266-D268
- https://doi.org/10.1093/nar/gki001
Abstract
PDBsum is a database of mainly pictorial summaries of the 3D structures of proteins and nucleic acids in the Protein Data Bank. Its pages aim to provide an at-a-glance view of the contents of every 3D structure, plus detailed structural analyses of each protein chain, DNA–RNA chain and any bound ligands and metals. In the past year, the database has been significantly improved, in terms of both appearance and new content. Moreover, it has moved to its new address at http://www.ebi.ac.uk/thornton-srv/databases/pdbsum.Keywords
This publication has 12 references indexed in Scilit:
- Recent improvements to the PROSITE databaseNucleic Acids Research, 2004
- ConSurf: Identification of Functional Regions in Proteins by Surface-Mapping of Phylogenetic InformationBioinformatics, 2003
- The ENZYME database in 2000Nucleic Acids Research, 2000
- Assigning genomic sequences to CATHNucleic Acids Research, 2000
- KEGG: Kyoto Encyclopedia of Genes and GenomesNucleic Acids Research, 2000
- The Protein Data BankNucleic Acids Research, 2000
- Three-dimensional structure analysis of PROSITE patterns 1 1Edited by F. E. CohenJournal of Molecular Biology, 1999
- PDBsum: a web-based database of summaries and analyses of all PDB structuresTrends in Biochemical Sciences, 1997
- [26] Raster3D: Photorealistic molecular graphicsPublished by Elsevier ,1997
- PROMOTIF—A program to identify and analyze structural motifs in proteinsProtein Science, 1996