MMTSB Tool Set: enhanced sampling and multiscale modeling methods for applications in structural biology
Top Cited Papers
- 7 February 2004
- journal article
- Published by Elsevier in Journal of Molecular Graphics and Modelling
- Vol. 22 (5) , 377-395
- https://doi.org/10.1016/j.jmgm.2003.12.005
Abstract
No abstract availableKeywords
This publication has 52 references indexed in Scilit:
- Generalized ensemble techniques and protein folding simulationsComputer Physics Communications, 2002
- Generalized-ensemble simulations of spin systems and protein systemsComputer Physics Communications, 2002
- Free Energy Surface of the Helical Peptide Y(MEARA)6The Journal of Physical Chemistry B, 2000
- The Protein Data BankNucleic Acids Research, 2000
- Replica-exchange molecular dynamics method for protein foldingChemical Physics Letters, 1999
- All-Atom Empirical Potential for Molecular Modeling and Dynamics Studies of ProteinsThe Journal of Physical Chemistry B, 1998
- AMBER, a package of computer programs for applying molecular mechanics, normal mode analysis, molecular dynamics and free energy calculations to simulate the structural and energetic properties of moleculesComputer Physics Communications, 1995
- Backbone-dependent Rotamer Library for Proteins Application to Side-chain PredictionJournal of Molecular Biology, 1993
- Dictionary of protein secondary structure: Pattern recognition of hydrogen‐bonded and geometrical featuresBiopolymers, 1983
- CHARMM: A program for macromolecular energy, minimization, and dynamics calculationsJournal of Computational Chemistry, 1983