The use of evolutionary patterns in protein annotation

This publication has 81 references indexed in Scilit:

• FTSite: high accuracy detection of ligand binding sites on unbound protein structures
  Bioinformatics, 2011
• Sequence and structure continuity of evolutionary importance improves protein functional site discovery and annotation
  Protein Science, 2010
• Evolution-guided discovery and recoding of allosteric pathway specificity determinants in psychoactive bioamine receptors
  Proceedings of the National Academy of Sciences, 2010
• I-TASSER: a unified platform for automated protein structure and function prediction
  Nature Protocols, 2010
• Evolutionary Trace Annotation of Protein Function in the Structural Proteome
  Journal of Molecular Biology, 2009
• ESG: extended similarity group method for automated protein function prediction
  Bioinformatics, 2009
• Predicting Protein Function and Binding Profile via Matching of Local Evolutionary and Geometric Surface Patterns
  Journal of Molecular Biology, 2009
• Prediction of ligand binding sites using homologous structures and conservation at CASP8
  Proteins-Structure Function and Bioinformatics, 2009
• ConFunc—functional annotation in the twilight zone
  Bioinformatics, 2008
• Derivation of 3D coordinate templates for searching structural databases: Application to ser‐His‐Asp catalytic triads in the serine proteinases and lipases
  Protein Science, 1996