Analysis of Expression Data: An Overview
Open Access
- 1 July 2007
- journal article
- unit
- Published by Wiley in Current Protocols in Human Genetics
- Vol. 54 (1) , 11.4.1-11.4.14
- https://doi.org/10.1002/0471142905.hg1104s54
Abstract
After providing a brief introduction to microarray chips and experimental details, this overview discusses analysis techniques. Data analysis from microarray experiments generally involves two parts: acquiring and normalizing the data, and interpreting it. This unit focuses mostly on the latter, as it is less technology‐specific.Curr. Protoc. Hum. Genet. 54:11.4.1‐11.4.14. © 2007 by John Wiley & Sons, Inc.Keywords
This publication has 31 references indexed in Scilit:
- ArrayExpress--a public database of microarray experiments and gene expression profilesNucleic Acids Research, 2006
- NCBI GEO: mining tens of millions of expression profiles--database and tools updateNucleic Acids Research, 2006
- GenePattern 2.0Nature Genetics, 2006
- Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction NetworksGenome Research, 2003
- GenMAPP, a new tool for viewing and analyzing microarray data on biological pathwaysNature Genetics, 2002
- Significance analysis of microarrays applied to the ionizing radiation responseProceedings of the National Academy of Sciences, 2001
- Analysis of Variance for Gene Expression Microarray DataJournal of Computational Biology, 2000
- Computational identification of Cis -regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae 1 1Edited by F. E. CohenJournal of Molecular Biology, 2000
- A DNA microarray system for analyzing complex DNA samples using two-color fluorescent probe hybridization.Genome Research, 1996
- Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA MicroarrayScience, 1995