Further analysis and comparative study of intermolecular interactions using dimers from the S22 database
- 10 August 2009
- journal article
- conference paper
- Published by AIP Publishing in The Journal of Chemical Physics
- Vol. 131 (6) , 065102
- https://doi.org/10.1063/1.3173809
Abstract
Accurate MP2 and CCSD(T) complete basis set (CBS) interaction energy curves (14 points for each curve) have been obtained for 20 of the dimers reported in the S22 set and analytical Morse curves have been fitted that can be used in developing updated density functional theory (DFT) and force field models. The magnitude and the effect of the basis set superposition error (BSSE) were carefully investigated. We found that going up to aug-cc-pVDZ and aug-cc-pVTZ basis sets is enough to obtain accurate CBS MP2 energies when BSSE corrected values are used but aug-cc-pVTZ and aug-cc-pVQZ basis sets are needed when the BSSE uncorrected total energies are used in CBS extrapolations. MP2 interaction energies with smaller basis sets such as are found to have very little dispersion energy and that the true source of dispersion attributed attractive interactions is almost entirely due to BSSE. MP2 and CCSD(T) CBS interaction energies are found to be very close to one another if aromatic systems are not involved. Comparative analyses have been performed with semiempirical and ab initio methods utilizing the moderate in size but affordable basis set both of which can be readily applied to macromolecular systems. The new M06-2X and M06-L DFT functionals were found to be more accurate than all methods tested herein. Interaction energy curves using the SG1 grid showed discontinuities for several of the dimer systems but this problem disappeared when finer DFT numerical grids were used.
Keywords
This publication has 99 references indexed in Scilit:
- An application of the van der Waals density functional: Hydrogen bonding and stacking interactions between nucleobasesThe Journal of Chemical Physics, 2008
- Assessment of Density Functional Theory Methods for the Computation of Heats of Formation and Ionization Potentials of Systems Containing Third Row Transition MetalsThe Journal of Physical Chemistry A, 2007
- Improving Docking Accuracy through Molecular Mechanics Generalized Born Optimization and ScoringJournal of Chemical Theory and Computation, 2007
- Critical Assessment of the Performance of Density Functional Methods for Several Atomic and Molecular PropertiesJournal of Chemical Theory and Computation, 2007
- Density Functionals for Noncovalent Interaction Energies of Biological ImportanceJournal of Chemical Theory and Computation, 2006
- Efficient implementation of the fast multipole methodThe Journal of Chemical Physics, 2006
- “Learn on the Fly”: A Hybrid Classical and Quantum-Mechanical Molecular Dynamics SimulationPhysical Review Letters, 2004
- Development and testing of a general amber force fieldJournal of Computational Chemistry, 2004
- Comparative assessment of a new nonempirical density functional: Molecules and hydrogen-bonded complexesThe Journal of Chemical Physics, 2003
- Benchmark calculations with correlated molecular wave functions. II. Configuration interaction calculations on first row diatomic hydridesThe Journal of Chemical Physics, 1993