Tilescope: online analysis pipeline for high-density tiling microarray data

Open Access

14 May 2007

journal article
software
Published by Springer Nature in Genome Biology

Vol. 8 (5) , R81
https://doi.org/10.1186/gb-2007-8-5-r81

Abstract

We developed Tilescope, a fully integrated data processing pipeline for analyzing high-density tiling-array data http://tilescope.gersteinlab.org. In a completely automated fashion, Tilescope will normalize signals between channels and across arrays, combine replicate experiments, score each array element, and identify genomic features. The program is designed with a modular, three-tiered architecture, facilitating parallelism, and a graphic user-friendly interface, presenting results in an organized web page, downloadable for further analysis.

Keywords

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