Phenopedia and Genopedia: disease-centered and gene-centered views of the evolving knowledge of human genetic associations
Open Access
- 27 October 2009
- journal article
- research article
- Published by Oxford University Press (OUP) in Bioinformatics
- Vol. 26 (1) , 145-146
- https://doi.org/10.1093/bioinformatics/btp618
Abstract
Summary: We developed web-based applications that encourage the exploration of the literature on human genetic associations by using a database that is continuously updated from PubMed. These applications provide user-friendly interfaces for searching summarized information on human genetic associations, using either genes or diseases as the starting point. Availability: Phenopedia and Genopedia can be freely accessed at http://www.hugenavigator.net/HuGENavigator/startPagePhenoPedia.do and http://www.hugenavigator.net/HuGENavigator/startPagePedia.do, respectively. Contact:wby0@cdc.gov Supplementary information: Supplementary data are available at Bioinformatics online.Keywords
This publication has 14 references indexed in Scilit:
- Genome-Wide Association Studies, Field Synopses, and the Development of the Knowledge Base on Genetic Variation and Human DiseasesAmerican Journal of Epidemiology, 2009
- The positives, protocols, and perils of genome‐wide associationAmerican Journal Of Medical Genetics Part B-Neuropsychiatric Genetics, 2008
- GAPscreener: An automatic tool for screening human genetic association literature in PubMed using the support vector machine techniqueBMC Bioinformatics, 2008
- A navigator for human genome epidemiologyNature Genetics, 2008
- An open source infrastructure for managing knowledge and finding potential collaborators in a domain-specific subset of PubMed, with an example from human genome epidemiologyBMC Bioinformatics, 2007
- SNP Genotyping: Technologies and Biomedical ApplicationsAnnual Review of Biomedical Engineering, 2007
- The human disease networkProceedings of the National Academy of Sciences, 2007
- Pathway Mapping Tools for Analysis of High Content DataPublished by Springer Nature ,2006
- Tracking the Epidemiology of Human Genes in the Literature: The HuGE Published Literature DatabaseAmerican Journal of Epidemiology, 2006
- KEGG: Kyoto Encyclopedia of Genes and GenomesNucleic Acids Research, 2000