An Overview of CellML 1.1, a Biological Model Description Language
- 1 December 2003
- journal article
- other
- Published by SAGE Publications in SIMULATION
- Vol. 79 (12) , 740-747
- https://doi.org/10.1177/0037549703040939
Abstract
CellML is an XML-based exchange format developed by the University of Auckland in collaboration with Physiome Sciences, Inc. CellML 1.1 has a component-based architecture allowing a modeller to build complex systems of models that expand and reuse previously published models. CellML Metadata is a format for encoding contextual information for a model. CellML 1.1 can be used in conjunction with CellML Metadata to provide a complete description of the structure and underlying mathematics of biological models. A repository of over 200 electrophysiological, mechanical, signal transduction, and metabolic pathway models is available at www.cellml.org.Keywords
This publication has 4 references indexed in Scilit:
- Modelling cardiac electro-mechanics: From CellML to the whole heartIFAC Proceedings Volumes, 2003
- The systems biology markup language (SBML): a medium for representation and exchange of biochemical network modelsBioinformatics, 2003
- Stretch activated ion channels in myocytes: parameter estimation, simulations and phenomenaPublished by Institute of Electrical and Electronics Engineers (IEEE) ,2002
- A short introduction to CellMLPhilosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 2001