A Computational Framework for the Topological Analysis and Targeted Disruption of Signal Transduction Networks
- 1 July 2006
- journal article
- Published by Elsevier in Biophysical Journal
- Vol. 91 (1) , 382-398
- https://doi.org/10.1529/biophysj.105.069724
Abstract
No abstract availableKeywords
This publication has 71 references indexed in Scilit:
- Integrative analysis of the cancer transcriptomeNature Genetics, 2005
- An integrated approach for inference and mechanistic modeling for advancing drug developmentFEBS Letters, 2005
- Space in systems biology of signaling pathways – towards intracellular molecular crowding in silicoFEBS Letters, 2005
- The PANTHER database of protein families, subfamilies, functions and pathwaysNucleic Acids Research, 2004
- Topology and Robustness in the Drosophila Segment Polarity NetworkPLoS Biology, 2004
- Topological analysis of mass-balanced signaling networks: a framework to obtain network properties including crosstalkJournal of Theoretical Biology, 2004
- Optknock: A bilevel programming framework for identifying gene knockout strategies for microbial strain optimizationBiotechnology & Bioengineering, 2003
- The systems biology markup language (SBML): a medium for representation and exchange of biochemical network modelsBioinformatics, 2003
- BIND: the Biomolecular Interaction Network DatabaseNucleic Acids Research, 2003
- Theory for the Systemic Definition of Metabolic Pathways and their use in Interpreting Metabolic Function from a Pathway-Oriented PerspectiveJournal of Theoretical Biology, 2000