Sequencing of 50 Human Exomes Reveals Adaptation to High Altitude
Top Cited Papers
- 2 July 2010
- journal article
- other
- Published by American Association for the Advancement of Science (AAAS) in Science
- Vol. 329 (5987) , 75-78
- https://doi.org/10.1126/science.1190371
Abstract
No Genetic Vertigo: Peoples living in high altitudes have adapted to their situation (see the Perspective by Storz ). To identify gene regions that might have contributed to high-altitude adaptation in Tibetans, Simonson et al. (p. 72 , published online 13 May) conducted a genome scan of nucleotide polymorphism comparing Tibetans, Han Chinese, and Japanese, while Yi et al. (p. 75 ) performed comparable analyses on the coding regions of all genes—their exomes. Both studies converged on a gene, endothelial Per-Arnt-Sim domain protein 1 (also known as hypoxia-inducible factor 2 α), which has been linked to the regulation of red blood cell production. Other genes identified that were potentially under selection included adult and fetal hemoglobin and two functional candidate loci that were correlated with low hemoglobin concentration in Tibetans. Future detailed functional studies will now be required to examine the mechanistic underpinnings of physiological adaptation to high altitudes.Keywords
This publication has 26 references indexed in Scilit:
- Inferring the Joint Demographic History of Multiple Populations from Multidimensional SNP Frequency DataPLoS Genetics, 2009
- The Origins of Lactase Persistence in EuropePLoS Computational Biology, 2009
- Evolutionary and functional insights into the mechanism underlying high-altitude adaptation of deer mouse hemoglobinProceedings of the National Academy of Sciences, 2009
- SOAP2: an improved ultrafast tool for short read alignmentBioinformatics, 2009
- Structural and functional effects of hereditary hemolytic anemia-associated point mutations in the alpha spectrin tetramer siteBlood, 2008
- A Gain-of-Function Mutation in theHIF2AGene in Familial ErythrocytosisNew England Journal of Medicine, 2008
- Direct selection of human genomic loci by microarray hybridizationNature Methods, 2007
- Two routes to functional adaptation: Tibetan and Andean high-altitude nativesProceedings of the National Academy of Sciences, 2007
- A Genetic Association Study of Chromosome 11q22-24 in Two Different Samples Implicates the FXYD6 Gene, Encoding Phosphohippolin, in Susceptibility to SchizophreniaAmerican Journal of Human Genetics, 2007
- Suppression of Hypoxia-inducible Factor 1α (HIF-1α) Transcriptional Activity by the HIF Prolyl Hydroxylase EGLN1Journal of Biological Chemistry, 2005