Analysis of the plasticity of location of the Arg244 positive charge within the active site of the TEM‐1 β‐lactamase
Open Access
- 23 September 2009
- journal article
- research article
- Published by Wiley in Protein Science
- Vol. 18 (10) , 2080-2089
- https://doi.org/10.1002/pro.220
Abstract
A large number of β‐lactamases have emerged that are capable of conferring bacterial resistance to β‐lactam antibiotics. Comparison of the structural and functional features of this family has refined understanding of the catalytic properties of these enzymes. An arginine residue present at position 244 in TEM‐1 β‐lactamase interacts with the carboxyl group common to penicillin and cephalosporin antibiotics and thereby stabilizes both the substrate and transition state complexes. A comparison of class A β‐lactamase sequences reveals that arginine at position 244 is not conserved, although a positive charge at this structural location is conserved and is provided by an arginine at positions 220 or 276 for those enzymes lacking arginine at position 244. The plasticity of the location of positive charge in the β‐lactamase active site was experimentally investigated by relocating the arginine at position 244 in TEM‐1 β‐lactamase to positions 220, 272, and 276 by site‐directed mutagenesis. Kinetic analysis of the engineered β‐lactamases revealed that removal of arginine 244 by alanine mutation reduced catalytic efficiency against all substrates tested and restoration of an arginine at positions 272 or 276 partially suppresses the catalytic defect of the Arg244Ala substitution. These results suggest an evolutionary mechanism for the observed divergence of the position of positive charge in the active site of class A β‐lactamases.Keywords
Funding Information
- NIH (AI32956)
- Keck Center Pharmacoinformatics Training Program of the Gulf Coast Consortia, NIH (T90 DK070109-04)
This publication has 42 references indexed in Scilit:
- Genetic and Structural Characterization of an L201P Global Suppressor Substitution in TEM-1 β-LactamaseJournal of Molecular Biology, 2008
- Structure-function studies of arginine at position 276 in CTX-M -lactamasesJournal of Antimicrobial Chemotherapy, 2008
- Backbone Dynamics of TEM-1 Determined by NMR: Evidence for a Highly Ordered ProteinBiochemistry, 2006
- Atomic Resolution Structures of CTX-M β-Lactamases: Extended Spectrum Activities from Increased Mobility and Decreased StabilityJournal of Molecular Biology, 2005
- A Family of Evolution–Entropy Hybrid Methods for Ranking Protein Residues by ImportanceJournal of Molecular Biology, 2004
- Effect of substitution of Asn for Arg-276 in the cefotaxime-hydrolyzing class A β-lactamase CTX-M-4FEMS Microbiology Letters, 1998
- SWISS‐MODEL and the Swiss‐Pdb Viewer: An environment for comparative protein modelingElectrophoresis, 1997
- Amino Acid Sequence Determinants of β-Lactamase Structure and ActivityJournal of Molecular Biology, 1996
- An Evolutionary Trace Method Defines Binding Surfaces Common to Protein FamiliesJournal of Molecular Biology, 1996
- Arginine 220 is a critical residue for the catalytic mechanism of the Streptomyces albus G β-lactamaseProtein Engineering, Design and Selection, 1991