Structural and functional analysis of mutations at the human hypoxanthine phosphoribosyl transferase (HPRT1) locus
- 30 April 2004
- journal article
- research article
- Published by Hindawi Limited in Human Mutation
- Vol. 23 (6) , 599-611
- https://doi.org/10.1002/humu.20047
Abstract
Hypoxanthine phosphoribosyl transferase (HPRT, also known as HGPRT) is an often-used genetic marker in eukaryotic cells. The gene is conserved from bacteria to human, with retained catalytic activity, although substrate specificity may have changed, and the enzyme is essential in malaria-causing protozoans. Inherited mutations in the human HPRT1 gene result in three different phenotypes: Lesch-Nyhan syndrome (LNS or LND), LND variants, and HPRT-related hyperuricemia (HRH). In cultured cells, loss of HPRT activity gives rise to 6-thioguanine (6-TG) resistance. In general, cells from LND patients are also 6-TG resistant, whereas cells from HRH patients are not, with some interesting exceptions. Using modeling methods, we have studied the correlation between the mutable and nonmutated amino acid residues on one hand, and sequence conservation and predicted phenotypic effects on the other hand. Our results demonstrate that most of the mutations are explainable by the predicted effect on protein structure and function. They are also consistent with sequence conservation. Moreover, the mutational profiles of TG-resistant cells and LND overlap to a great extent, while most of the mutations in HRH are unique to that condition. We have also noticed a strong correlation between mutations in the tetramer interfaces and observed phenotypes, suggesting a functional role for a tetramer transition during catalysis. Hum Mutat 23:599–611, 2004.Keywords
This publication has 39 references indexed in Scilit:
- GenBankNucleic Acids Research, 2002
- The Protein Data BankNucleic Acids Research, 2000
- Ternary complex structure of human hgprtase, prpp, mg2+, and the inhibitor HPP reveals the involvement of the flexible loop in substrate bindingProtein Science, 1999
- Spectrum of somatic mutation at the hypoxanthine phosphoribosyltransferase (hprt) gene of healthy peopleCarcinogenesis: Integrative Cancer Research, 1996
- Relational database model for DNA mutations and a software program for implementation of the modelMutation Research/Environmental Mutagenesis and Related Subjects, 1996
- Software for the analysis of mutations at the human hprt geneMutation Research/Environmental Mutagenesis and Related Subjects, 1994
- Working paper no. 3 Somatic mutant frequency, mutation rates and mutational spectra in the human population in vivoMutation Research - Fundamental and Molecular Mechanisms of Mutagenesis, 1994
- Hprt activities and RNA phenotypes in 6-thioguanine resistant human T-lymphocytesMutation Research - Fundamental and Molecular Mechanisms of Mutagenesis, 1993
- IN VIVO SOMATIC MUTATIONS IN HUMANS: MEASUREMENT AND ANALYSISAnnual Review of Genetics, 1990
- T-cell cloning to detect the mutant 6-thioguanine-resistant lymphocytes present in human peripheral blood.Proceedings of the National Academy of Sciences, 1982