A consistent picture of protein dynamics.
- 1 November 1984
- journal article
- research article
- Published by Proceedings of the National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 81 (22) , 7088-7092
- https://doi.org/10.1073/pnas.81.22.7088
Abstract
Information about the protein dynamics myoglobin obtained by X-ray and Mossbauer investigations is analyzed and compared with computer simulations. Computer simulations give correct amplitudes of mean-square displacements but fail in the description of the time dependence of motions. The model describes protein dynamics at physiological temperatures as an overdamped diffusion-like motion in a restricted space. The fluctuations occur around the average conformation determined by X-ray structure analysis. The gain in entropy drives the molecule into the transition state and, in this way, accounts for its flexibility.Keywords
This publication has 15 references indexed in Scilit:
- Computer simulation of the dynamics of hydrated protein crystals and its comparison with x-ray data.Proceedings of the National Academy of Sciences, 1983
- Protein dynamicsJournal of Molecular Biology, 1982
- Conformational substates in a protein: structure and dynamics of metmyoglobin at 80 K.Proceedings of the National Academy of Sciences, 1982
- Protein Conformation, Dynamics, and Folding by Computer SimulationAnnual Review of Biophysics and Bioengineering, 1982
- Dynamics of metmyoglobin crystals investigated by nuclear gamma resonance absorptionJournal of Molecular Biology, 1981
- Temperature-dependent X-ray diffraction as a probe of protein structural dynamicsNature, 1979
- Crystallographic studies of the dynamic properties of lysozymeNature, 1979
- [18] Low frequency vibrations and the dynamics of proteins and polypeptidesPublished by Elsevier ,1979
- Dynamics of the aromatic amino acid residues in the globular conformation of the basic pancreatic trypsin inhibitor (BPTI)European Biophysics Journal, 1976
- Dynamics of ligand binding to myoglobinBiochemistry, 1975