Molecular View of Water Dynamics near Model Peptides
- 8 June 2005
- journal article
- research article
- Published by American Chemical Society (ACS) in The Journal of Physical Chemistry B
- Vol. 109 (26) , 12966-12975
- https://doi.org/10.1021/jp051137k
Abstract
Incoherent quasi-elastic neutron scattering (QENS) has been used to measure the dynamics of water molecules in solutions of a model protein backbone, N-acetyl-glycine-methylamide (NAGMA), as a function of concentration, for comparison with results for water dynamics in aqueous solutions of the N-acetyl-leucine-methylamide (NALMA) hydrophobic peptide at comparable concentrations. From the analysis of the elastic incoherent structure factor, we find significant fractions of elastic intensity at high and low concentrations for both solutes, which corresponds to a greater population of protons with rotational time scales outside the experimental resolution (>13 ps). The higher-concentration solutions show a component of the elastic fraction that we propose is due to water motions that are strongly coupled to the solute motions, while for low-concentration solutions an additional component is activated due to dynamic coupling between inner and outer hydration layers. An important difference between the solute types at the highest concentration studied is found from stretched exponential fits to their experimental intermediate scattering functions, showing more pronounced anomalous diffusion signatures for NALMA, including a smaller stretched exponent β and a longer structural relaxation time τ than those found for NAGMA. The more normal water diffusion exhibited near the hydrophilic NAGMA provides experimental support for an explanation of the origin of the anomalous diffusion behavior of NALMA as arising from frustrated interactions between water molecules when a chemical interface is formed upon addition of a hydrophobic side chain, inducing spatial heterogeneity in the hydration dynamics in the two types of regions of the NALMA peptide. We place our QENS measurements on model biological solutes in the context of other spectroscopic techniques and provide both confirming as well as complementary dynamic information that attempts to give a unifying molecular view of hydration dynamics signatures near peptides and proteins.Keywords
This publication has 87 references indexed in Scilit:
- Translational Hydration Water Dynamics Drives the Protein Glass TransitionBiophysical Journal, 2003
- Hydrogen-Bond Kinetics in the Solvation Shell of a PolypeptideThe Journal of Physical Chemistry B, 2001
- Amplitudes and Frequencies of Protein Dynamics: Analysis of Discrepancies between Neutron Scattering and Molecular Dynamics SimulationsJournal of the American Chemical Society, 2000
- The Temperature Dependence of Internal Molecular Motions in Hydrated and Dry α-Amylase: The Role of Hydration Water in the Dynamical Transition of ProteinsBiophysical Journal, 1999
- Slow dynamics of water molecules on the surface of a globular proteinFaraday Discussions, 1996
- Anomalous diffusion of adsorbed water: a neutron scattering study of hydrated myoglobinFaraday Discussions, 1996
- Protein-Water Interactions Determined by Dielectric MethodsAnnual Review of Physical Chemistry, 1992
- Experimental determination of the nature of diffusive motions of water molecules at low temperaturesPhysical Review A, 1985
- THEORY OF COLD NEUTRON SCATTERING BY HOMONUCLEAR DIATOMIC LIQUIDS: II. HINDERED ROTATIONCanadian Journal of Physics, 1966
- Dielectric Relaxation and the Internal FieldThe Journal of Chemical Physics, 1953