Functional and Evolutionary Relationship between Arginine Biosynthesis and Prokaryotic Lysine Biosynthesis through α-Aminoadipate
- 1 September 2001
- journal article
- Published by American Society for Microbiology in Journal of Bacteriology
- Vol. 183 (17) , 5067-5073
- https://doi.org/10.1128/jb.183.17.5067-5073.2001
Abstract
Our previous studies revealed that lysine is synthesized through α-aminoadipate in an extremely thermophilic bacterium, Thermus thermophilus HB27. Sequence analysis of a gene cluster involved in the lysine biosynthesis of this microorganism suggested that the conversion from α-aminoadipate to lysine proceeds in a way similar to that of arginine biosynthesis. In the present study, we cloned an argD homolog of T. thermophilus HB27 which was not included in the previously cloned lysine biosynthetic gene cluster and determined the nucleotide sequence. A knockout of the argD -like gene, now termed lysJ , in T. thermophilus HB27 showed that this gene is essential for lysine biosynthesis in this bacterium. The lysJ gene was cloned into a plasmid and overexpressed in Escherichia coli , and the LysJ protein was purified to homogeneity. When the catalytic activity of LysJ was analyzed in a reverse reaction in the putative pathway, LysJ was found to transfer the ɛ-amino group of N 2 -acetyllysine, a putative intermediate in lysine biosynthesis, to 2-oxoglutarate. When N 2 -acetylornithine, a substrate for arginine biosynthesis, was used as the substrate for the reaction, LysJ transferred the δ-amino group of N 2 -acetylornithine to 2-oxoglutarate 16 times more efficiently than when N 2 -acetyllysine was the amino donor. All these results suggest that lysine biosynthesis in T. thermophilus HB27 is functionally and evolutionarily related to arginine biosynthesis.Keywords
This publication has 37 references indexed in Scilit:
- Genome of the Extremely Radiation-Resistant Bacterium Deinococcus radiodurans Viewed from the Perspective of Comparative GenomicsMicrobiology and Molecular Biology Reviews, 2001
- Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequenceNature, 1998
- Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii Science, 1996
- Sequence Analysis of the Genome of the Unicellular Cyanobacterium Synechocystis sp. Strain PCC6803. II. Sequence Determination of the Entire Genome and Assignment of Potential Protein-coding RegionsDNA Research, 1996
- CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choiceNucleic Acids Research, 1994
- Sequence and analysis of the citrulline biosynthetic operon argC-F from Bacillus subtilisMicrobiology, 1994
- The Entire Population ofThermus thermophilusCells Is Always Competent at Any Growth PhaseBioscience, Biotechnology, and Biochemistry, 1994
- A Rapid and Sensitive Method for the Quantitation of Microgram Quantities of Protein Utilizing the Principle of Protein-Dye BindingAnalytical Biochemistry, 1976
- A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye bindingAnalytical Biochemistry, 1976
- Distribution of Lysine Pathways Among Fungi: Evolutionary ImplicationsThe American Naturalist, 1964