Mapping of a Milk Production Quantitative Trait Locus to a 420-kb Region on Bovine Chromosome 6
Open Access
- 1 January 2005
- journal article
- Published by Oxford University Press (OUP) in Genetics
- Vol. 169 (1) , 275-283
- https://doi.org/10.1534/genetics.104.031559
Abstract
A QTL affecting milk production traits was previously mapped to an interval of 7.5 cM on chromosome 6 in Norwegian dairy cattle. This article aimed to refine this position by increasing the map density in the region by a set of single-nucleotide polymorphisms and analyzing the data with a combined linkage and linkage disequilibrium approach. Through a series of single- and multitrait and single- and multipoint analyses, the QTL was positioned to an interval surrounded by the genes ABCG2 and LAP3. As no recombinations were detected in this interval, physical mapping was required for further refining. By using radiation hybrid mapping as well as BAC clones, the bovine and human comparative maps in the region are resolved, and the QTL is mapped within a distance of 420 kb.Keywords
This publication has 36 references indexed in Scilit:
- Fine Mapping of Milk Production QTL on BTA6 by Combined Linkage and Linkage Disequilibrium AnalysisJournal of Dairy Science, 2004
- Polycystins 1 and 2 mediate mechanosensation in the primary cilium of kidney cellsNature Genetics, 2003
- A Genome Scan for Quantitative Trait Loci Affecting Milk Production in Norwegian Dairy CattleJournal of Dairy Science, 2002
- A bovine whole-genome radiation hybrid panel and outline mapMammalian Genome, 2002
- Targeted Construction of a High-Resolution, Integrated, Comprehensive, and Comparative Map for a Region Specific to Bovine Chromosome 6 Based on Radiation Hybrid MappingGenomics, 2002
- Prediction of identity by descent probabilities from marker-haplotypesGenetics Selection Evolution, 2001
- A search for quantitative trait loci for milk production traits on chromosome 6 in Finnish Ayrshire cattleAnimal Genetics, 1999
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programsNucleic Acids Research, 1997
- PolyPhred: automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencingNucleic Acids Research, 1997
- Isolation and application of chromosome 6 specific microsatellite markers for detection of QTL for milk‐production traits in cattleJournal of Animal Breeding and Genetics, 1996