Exiguobacterium oxidotolerans sp. nov., a novel alkaliphile exhibiting high catalase activity
- 1 November 2004
- journal article
- Published by Microbiology Society in International Journal of Systematic and Evolutionary Microbiology
- Vol. 54 (6) , 2013-2017
- https://doi.org/10.1099/ijs.0.63129-0
Abstract
A novel alkaliphile was isolated from a drain of a fish processing plant. The isolate grew at a pH range of 7–10. Cells were Gram-positive, facultatively aerobic, motile rods with peritrichous flagella. Colonies were orange or yellow in colour. Catalase and oxidase reactions were positive. The isolate grew in 0–12 % NaCl but not above 15 % NaCl. Its cell extract exhibited 567 times higher catalase activity than an Escherichia coli cell extract. The major cellular fatty acids were iso-C13 : 0, anteiso-C13 : 0, iso-C15 : 0, iso-C16 : 0, iso-C17 : 0, anteiso-C17 : 0 and iso-C17 : 1. Its DNA G+C content was 46·7 mol%. Phylogenetic analysis based on 16S rRNA gene sequencing and chemotaxonomic data indicated that strain T-2-2T is a member of the genus Exiguobacterium. DNA–DNA hybridization revealed a low relatedness of the isolate to several phylogenetic neighbours (less than 25 %). On the basis of phenotypic characteristics, phylogenetic data and DNA–DNA relatedness data, the isolate merits classification as a novel species, for which the name Exiguobacterium oxidotolerans sp. nov. is proposed. The type strain is T-2-2T (=JCM 12280T=NCIMB 13980T).Keywords
This publication has 24 references indexed in Scilit:
- Oxidative stress response in an anaerobe, Bacteroides fragilis: a role for catalase in protection against hydrogen peroxideJournal of Bacteriology, 1996
- Cowan and Steel's Manual for the Identification of Medical BacteriaPublished by Cambridge University Press (CUP) ,1993
- Characterization of catalase activities in a root-colonizing isolate of Pseudomonas putidaCanadian Journal of Microbiology, 1992
- Fluorometric Deoxyribonucleic Acid-Deoxyribonucleic Acid Hybridization in Microdilution Wells as an Alternative to Membrane Filter Hybridization in which Radioisotopes Are Used To Determine Genetic Relatedness among Bacterial StrainsInternational Journal of Systematic and Evolutionary Microbiology, 1989
- Chemotaxonomic Study of an Alkalophilic Bacterium, Exiguobacterium aurantiacum gen. nov., sp. nov.Microbiology, 1983
- A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequencesJournal of Molecular Evolution, 1980
- Lipids in the Classification and Identification of Coryneform Bacteria Containing Peptidoglycans Based on 2, 4‐diaminobutyric AcidJournal of Applied Bacteriology, 1980
- Fatty Acid and Polar Lipid Composition in the Classification of Cellulomonas, Oerskovia and Related TaxaJournal of Applied Bacteriology, 1979
- Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli.Proceedings of the National Academy of Sciences, 1978
- A procedure for the isolation of deoxyribonucleic acid from micro-organismsJournal of Molecular Biology, 1961