From components to regulatory motifs in signalling networks
Open Access
- 20 February 2006
- journal article
- review article
- Published by Oxford University Press (OUP) in Briefings in Functional Genomics and Proteomics
- Vol. 5 (1) , 57-61
- https://doi.org/10.1093/bfgp/ell004
Abstract
The developments in biochemistry and molecular biology over the past 30 years have produced an impressive parts list of cellular components. It has become increasingly clear that we need to understand how components come together to form systems. One area where this approach has been growing is cell signalling research. Here, instead of focusing on individual or small groups of signalling proteins, researchers are now using a more holistic perspective. This approach attempts to view how many components are working together in concert to process information and to orchestrate cellular phenotypic changes. Additionally, the advancements in experimental techniques to measure and visualize many cellular components at once gradually grow in diversity and accuracy. The multivariate data, produced by experiments, introduce new and exciting challenges for computational biologists, who develop models of cellular systems made up of interacting cellular components. The integration of high-throughput experimental results and information from legacy literature is expected to produce computational models that would rapidly enhance our understanding of the detail workings of mammalian cells.Keywords
This publication has 24 references indexed in Scilit:
- Formation of Regulatory Patterns During Signal Propagation in a Mammalian Cellular NetworkScience, 2005
- Evidence for Ectopic Neurotransmission at a Neuronal SynapseScience, 2005
- A Two-Way Bioinformatic StreetScience, 2004
- Adaptive stochastic-deterministic chemical kinetic simulationsBioinformatics, 2004
- The Gene Ontology (GO) database and informatics resourceNucleic Acids Research, 2004
- Dynamical and integrative cell signaling: challenges for the new biologyBiotechnology & Bioengineering, 2003
- Molecular Networks: The Top-Down ViewScience, 2003
- Computational systems biologyNature, 2002
- Emergence of Scaling in Random NetworksScience, 1999
- The SWISS-PROT protein sequence data bankNucleic Acids Research, 1991