Selective photostabilisation of guanine by methylationElectronic supplementary information (ESI) available: Figs. 2 and 3 in colour. See http://www.rsc.org/suppdata/cp/b3/b309031k/
- 12 September 2003
- journal article
- research article
- Published by Royal Society of Chemistry (RSC) in Physical Chemistry Chemical Physics
- Vol. 5 (20) , 4516-4518
- https://doi.org/10.1039/b309031k
Abstract
Structural and dynamic properties of N7-methyl and N9-methyl keto guanine in the lowest singlet ππ* electronically excited state, S1, have been investigated using a density functional restricted open-shell Kohn–Sham approach. The excited state geometry of N7-methyl guanine deviates little from the unmethylated N7H species, whereas N9-methyl guanine surprisingly exhibits large qualitative structural differences compared to the N9H tautomer. In particular the strongly out-of-plane bent amino group of N9-methyl guanine is expected to significantly reduce its optical absorption cross section in this spectral region. Furthermore, on-the-fly molecular dynamics simulations of S1 vertically excited N9-methyl keto guanine reveal that in the first roughly 10 fs after photoexcitation a local minimum corresponding to a quasi-planar geometry is populated which is, however, thermally unstable and decays to the heavily distorted global minimum structure on the timescale of 100 fs. In contrast, vertically excited N7-methyl keto guanine is seen to relax to its comparatively mildly distorted S1 global minimum structure within approximately 10 fs. These findings offer a possible explanation for the absence of a N9-methyl keto signal in recent molecular beam IR–UV spectral measurements. In addition, we propose that the special photophysical properties of the biologically relevant N9-substituted keto guanine tautomers may indeed have played an important role in the evolutionary selection of DNA building blocks.This publication has 5 references indexed in Scilit:
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