Fluorescence correlation spectroscopy with high-order and dual-color correlation to probe nonequilibrium steady states
- 17 February 2004
- journal article
- research article
- Published by Proceedings of the National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 101 (9) , 2828-2833
- https://doi.org/10.1073/pnas.0305962101
Abstract
In living cells, biochemical reaction networks often function in nonequilibrium steady states. Under these conditions, the networks necessarily have cyclic reaction kinetics that are maintained by sustained constant input and output, i.e., pumping. To differentiate this state from an equilibrium state without flux, we propose a microscopic method based on concentration fluctuation measurements, via fluorescence correlation spectroscopy, and statistical analyses of high-order correlations and cross correlations beyond the standard fluorescence correlation spectroscopy autocorrelation. We show that, for equilibrium systems with time reversibility, the correlation functions possess certain symmetries, the violation of which is a measure of steady-state fluxes in reaction cycles. This result demonstrates the theoretical basis for experimentally measuring reaction fluxes in a biochemical network in situ and the importance of single-molecule measurements in providing fundamental information on nonequilibrium steady-states in biochemistry.Keywords
This publication has 42 references indexed in Scilit:
- Equations for Stochastic Macromolecular Mechanics of Single Proteins: Equilibrium Fluctuations, Transient Kinetics, and Nonequilibrium Steady-StateThe Journal of Physical Chemistry B, 2002
- Mathematical formalism for isothermal linear irreversibilityProceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences, 2001
- Pumped Biochemical Reactions, Nonequilibrium Circulation, and Stochastic ResonancePhysical Review Letters, 2000
- An Ultrasensitive Bacterial Motor Revealed by Monitoring Signaling Proteins in Single CellsScience, 2000
- A generalization of Wegscheider's condition. Implications for properties of steady states and for quasi-steady-state approximationJournal of Mathematical Chemistry, 1989
- Molecular aggregation characterized by high order autocorrelation in fluorescence correlation spectroscopyBiophysical Journal, 1987
- White noise nonlinear system analysis in nuclear magnetic resonance spectroscopyProgress in Nuclear Magnetic Resonance Spectroscopy, 1987
- Noise as a source of information about dynamical properties of biological macromoleculesBiopolymers, 1987
- Noise Analysis of Kinetic Systems and its Applications to Membrane ChannelsAdvances in Chemical Physics, 1978
- Fluorescence correlation spectroscopy. II. An experimental realizationBiopolymers, 1974