2D NMR studies of aminoglycoside antibiotics. Use of relayed coherence transfer for proton resonance assignment and in situ structure elucidation of amikacin derivatives in reaction mixtures
- 19 April 1988
- journal article
- research article
- Published by American Chemical Society (ACS) in Biochemistry
- Vol. 27 (8) , 2782-2790
- https://doi.org/10.1021/bi00408a019
Abstract
Phase-sensitive 2D 1H/1H COSY spectra can be used to identify the structures of individual pure specimens of the aminoglycoside antibiotic amikacin and its N-hemisuccinyl derivatives. However, even at 500 MHz the 2D chemical shift dispersion does not allow for unambiguous assignment of all cross-peaks. By use of 2D relayed coherence transfer experiments (RELAY) optimized to detect two-step 1H/1H scalar interactions in which one of the J-values is small, sufficient additional correlations can be obtained from the frequency-isolated resonances to allow facile tracing of all scalar connectivities. Complete assignments of the 1H NMR spectra of amikacin, its 6''-N-hemisuccinamide, and a novel bis(acylate) [.gamma.-N-(p-vinylbenzoyl)amikacin 6''-N-hemisuccinamide] were obtained for aqueous media. The NMR spectrum of amikacin free base was also assigned in dimethyl sulfoxide solution. The ReLAY experiment can be extended to the analysis of reaction mixtures, which allows for the identification and resonance assignment of regioisomeric amikacin haptens in the mixture state. All of the N-monohemisuccinyl isomers of amikacin have been identified in reaction mixtures through the RELAY experiment. The relative reactivities of the amino functions of amikacin toward acylating agents were found to be 6''-N > 3-N .gtorsim. 3''''-N .gtorsim. .gamma.-N. However, this reactivity order is altered after the initial acylation event.Keywords
This publication has 13 references indexed in Scilit:
- Characterization of the oligosaccharide alditols from ovarian cyst mucin glycoproteins of blood group A using high pressure liquid chromatography (HPLC) and high field 1H NMR spectroscopy.Journal of Biological Chemistry, 1986
- An analysis of the 1H and 13C n.m.r. spectra of erythromycin a using two-dimensional methodsJournal of the Chemical Society, Perkin Transactions 1, 1985
- Multiple-step relayed correlation spectroscopy: sequential resonance assignments in oligosaccharides.Proceedings of the National Academy of Sciences, 1984
- Improved spectral resolution in COSY 1H NMR spectra of proteins via double quantum filteringBiochemical and Biophysical Research Communications, 1983
- Application of phase sensitive two-dimensional correlated spectroscopy (COSY) for measurements of 1H-1H spin-spin coupling constants in proteinsBiochemical and Biophysical Research Communications, 1983
- Determination of glycopeptide primary structure by 360-MHz proton magnetic resonance spectroscopyBiochemistry, 1981
- Quantitative monitoring of solid-phase peptide synthesis by the ninhydrin reactionAnalytical Biochemistry, 1981
- Structural analysis of glycosphingolipids by high-resolution proton nuclear magnetic resonance spectroscopyBiochemistry, 1980
- The syntheses and biological properties of 1-N-(S-4-amino-2-hydroxybutyryl)-gentamicin B and 1-N-(S-3-amino-2-hydroxypropionyl)-gentamicin B.The Journal of Antibiotics, 1978
- Amikacin Therapy for Severe Gram-Negative SepsisAnnals of Internal Medicine, 1975