The highest gene concentrations in the human genome are in telomeric bands of metaphase chromosomes.
- 1 June 1992
- journal article
- Published by Proceedings of the National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 89 (11) , 4913-4917
- https://doi.org/10.1073/pnas.89.11.4913
Abstract
Chromosome in situ suppression hybridization has been carried out on human metaphase chromosomes to localize the G+C-richest human DNA fraction (which only represents 3.5% of the genome), as isolated by preparative equilibrium centrifugation in Cs2SO4/3,6-bis(acetatomercurimethyl)-1,4-dioxane density gradient. This fraction essentially corresponds to isochore family H3. The rationale for carrying out this experiment is that this isochore family has, by far, the highest gene concentration, the highest concentration in CpG islands, the highest transcriptional and recombinational activity, and a distinct chromatin structure. The in situ hybridization results obtained show that the H3 isochore family is localized in two coincident sets of bands of human metaphase chromosomes: telomeric bands and chromomycin A3-positive 4',6-diamidino-2-phenylindole-negative bands. This result is the first step toward a complete compositional map of the human karyotype. Because the G+C gradient across isochore families is paralleled by a gene concentration gradient, such a map has structural, functional, and evolutionary relevance.Keywords
This publication has 29 references indexed in Scilit:
- Compositional properties of telomeric regions from human chromosomesFEBS Letters, 1991
- CpG islands: features and distribution in the genomes of vertebratesGene, 1991
- THE ISOCHORE ORGANIZATION OF THE HUMAN GENOMEAnnual Review of Genetics, 1989
- Delineation of individual human chromosomes in metaphase and interphase cells by in situ suppression hybridization using recombinant DNA librariesHuman Genetics, 1988
- Correlation of pachytene chromomeres and metaphase bands of human chromosomes, and distinctive properties of telomeric regionsCytogenetic and Genome Research, 1987
- Gene distribution and nucleotide sequence organization in the human genomeEuropean Journal of Biochemistry, 1986
- The Alu Family of Dispersed Repetitive SequencesScience, 1982
- The Major Components of the Mouse and Human GenomesEuropean Journal of Biochemistry, 1981
- The Major Components of the Mouse and Human GenomesEuropean Journal of Biochemistry, 1981
- An Analysis of the Bovine Genome by Density Gradient Centrifugation: Fractionation in Cs2SO4/3,6‐Bis(acetatomercurimethyl)dioxane Density GradientEuropean Journal of Biochemistry, 1977