The role of GTP in transient splitting of 70S ribosomes by RRF (ribosome recycling factor) and EF-G (elongation factor G)
Open Access
- 23 October 2008
- journal article
- research article
- Published by Oxford University Press (OUP) in Nucleic Acids Research
- Vol. 36  (21) , 6676-6687
- https://doi.org/10.1093/nar/gkn647
Abstract
Ribosome recycling factor (RRF), elongation factor G (EF-G) and GTP split 70S ribosomes into subunits. Here, we demonstrated that the splitting was transient and the exhaustion of GTP resulted in re-association of the split subunits into 70S ribosomes unless IF3 (initiation factor 3) was present. However, the splitting was observed with sucrose density gradient centrifugation (SDGC) without IF3 if RRF, EF-G and GTP were present in the SDGC buffer. The splitting of 70S ribosomes causes the decrease of light scattering by ribosomes. Kinetic constants obtained from the light scattering studies are sufficient to account for the splitting of 70S ribosomes by RRF and EF-G/GTP during the lag phase for activation of ribosomes for the log phase. As the amount of 70S ribosomes increased, more RRF, EF-G and GTP were necessary to split 70S ribosomes. In the presence of a physiological amount of polyamines, GTP and factors, even 0.6 ÎŒM 70S ribosomes (12 times higher than the 70S ribosomes for routine assay) were split. Spermidine (2 mM) completely inhibited anti-association activity of IF3, and the RRF/EF-G/GTP-dependent splitting of 70S ribosomes.Keywords
This publication has 63 references indexed in Scilit:
- Complementary roles of initiation factor 1 and ribosome recycling factor in 70S ribosome splittingThe EMBO Journal, 2008
- Structural Insights into Ribosome Recycling Factor Interactions with the 70S RibosomeJournal of Molecular Biology, 2008
- Inhibition of Antiassociation Activity of Translation Initiation Factor 3 by ParomomycinAntimicrobial Agents and Chemotherapy, 2007
- Reverse Translocation of tRNA in the RibosomeMolecular Cell, 2006
- Role and timing of GTP binding and hydrolysis during EF-G-dependent tRNA translocation on the ribosomeProceedings of the National Academy of Sciences, 2006
- A Leaderless mRNA Can Bind to Mammalian 80S Ribosomes and Direct Polypeptide Synthesis in the Absence of Translation Initiation FactorsMolecular and Cellular Biology, 2006
- Release factor RF3 in E.coli accelerates the dissociation of release factors RF1 and RF2 from the ribosome in a GTP-dependent mannerThe EMBO Journal, 1997
- Hydrolysis of GTP by elongation factor G drives tRNA movement on the ribosomeNature, 1997
- A highly conserved eukaryotic protein family possessing properties of polypeptide chain release factorNature, 1994
- Release factors differing in specificity for terminator codons.Proceedings of the National Academy of Sciences, 1968